Bio Cigar解析CIGAR字符串并将坐标转换为参考查询

名称 Bio::Cigar - 解析 CIGAR 字符串并将坐标转换为/从参考/查询概要

use 5.014;

use Bio::Cigar;



my $cigar = Bio::Cigar->new(\"2M1D1M1I4M\");

say \"Query length is \", $cigar->query_length;

say \"Reference length is \", $cigar->reference_length;

my ($qpos, $op) = $cigar->rpos_to_qpos(3);

say \"Alignment operation at reference position 3 is $op\";

描述 Bio::Cigar 是一个小型库，用于解析 CIGAR 字符串（“Compact Idiosyncratic Gapped Alignment Report”）并将其坐标转换为查询和参考坐标。